Workshop TFDA Comp-Bio
Tuesday, 22 October 2024 -
09:30
Monday, 21 October 2024
Tuesday, 22 October 2024
09:30
09:30 - 12:00
Welcome
Welcome
09:30 - 09:35
09:35
Prof. Mario Nicodemi (Coordinatore TFDA Biologia Computazionale e Quantitativa)
Prof. Mario Nicodemi (Coordinatore TFDA Biologia Computazionale e Quantitativa)
09:35 - 09:43
Prof. Mario Nicodemi (Coordinatore TFDA Biologia Computazionale e Quantitativa)
09:43
Prof. Luca Lista (Direttore INFN, Sezione di Napoli)
Prof. Luca Lista (Direttore INFN, Sezione di Napoli)
09:43 - 09:51
09:51
Prof. Gionata De Vico (Direttore Dipartimento di Biologia)
Prof. Gionata De Vico (Direttore Dipartimento di Biologia)
09:51 - 09:59
09:59
Prof.ssa Franca Esposito (Direttrice del Dipartimento di Medicina Molecolare e Biotecnologie Mediche)
Prof.ssa Franca Esposito (Direttrice del Dipartimento di Medicina Molecolare e Biotecnologie Mediche)
09:59 - 10:07
10:07
Dr.ssa Valeria Fascione (Assessore alla Ricerca Regione Campania)
Dr.ssa Valeria Fascione (Assessore alla Ricerca Regione Campania)
10:07 - 10:13
10:13
Prof.ssa Maura Striano (Assessore all'Istruzione Comune di Napoli)
Prof.ssa Maura Striano (Assessore all'Istruzione Comune di Napoli)
10:13 - 10:19
10:19
Prof.ssa Barbara Majello (Delegato del Rettore alla didattica ed alla innovazione didattica)
Prof.ssa Barbara Majello (Delegato del Rettore alla didattica ed alla innovazione didattica)
10:19 - 10:25
10:25
Prof. Stefano Amente (Dipartimento di Medicina Molecolare e Biotecnologie Mediche)
Prof. Stefano Amente (Dipartimento di Medicina Molecolare e Biotecnologie Mediche)
10:25 - 10:31
10:31
Prof. Carlo Altucci (Dipartimento di Scienze Biomediche Avanzate)
Prof. Carlo Altucci (Dipartimento di Scienze Biomediche Avanzate)
10:31 - 10:39
10:39
Prof. Alfonso De Simone (Dipartimento di Farmacia)
Prof. Alfonso De Simone (Dipartimento di Farmacia)
10:39 - 10:47
10:47
Prof. Massimiliano Fraldi (Dipartimento di Strutture per l'Ingegneria e l'Architettura)
Prof. Massimiliano Fraldi (Dipartimento di Strutture per l'Ingegneria e l'Architettura)
10:47 - 10:55
10:55
Dr. Andrea Maria Chiariello (Dipartimento di Fisica "Ettore Pancini")
Dr. Andrea Maria Chiariello (Dipartimento di Fisica "Ettore Pancini")
10:55 - 11:00
11:00
Coffee Break
Coffee Break
11:00 - 11:30
11:30
Dr.ssa Lorena Postiglione (TIGEM)
Dr.ssa Lorena Postiglione (TIGEM)
11:30 - 11:38
11:38
Prof. Antonello Merlino (Dipartimento di Scienze Chimiche)
Prof. Antonello Merlino (Dipartimento di Scienze Chimiche)
11:38 - 11:46
11:46
Prof. Alfredo Nicosia (Dip.to di Medicina Molecolare e Biotecnologie Mediche)
Prof. Alfredo Nicosia (Dip.to di Medicina Molecolare e Biotecnologie Mediche)
11:46 - 11:54
11:54
Prof. Edoardo Pasolli (Dipartimento di Agraria)
Prof. Edoardo Pasolli (Dipartimento di Agraria)
11:54 - 12:00
12:00
12:00 - 13:00
The Role of Bioinformatics in Plant Genetic Improvement
-
Nunzio D'Agostino
The Role of Bioinformatics in Plant Genetic Improvement
Nunzio D'Agostino
12:00 - 12:09
12:09
Functional Genomics in biomedicine: an integrative approached dealing with energetic metabolism, innate immune regulation and calcium (Ca2++) signaling
-
Massimo Zollo
Functional Genomics in biomedicine: an integrative approached dealing with energetic metabolism, innate immune regulation and calcium (Ca2++) signaling
Massimo Zollo
12:09 - 12:18
12:18
Preclinical tumor organoid models in gastric cancer: the missing link for targeted therapy and personalized cancer treatment
-
Pietro Zoppoli
Preclinical tumor organoid models in gastric cancer: the missing link for targeted therapy and personalized cancer treatment
Pietro Zoppoli
12:18 - 12:27
12:27
Force-biased nuclear import sets nuclear-cytoplasmic volumetric coupling by osmosis.
-
Paolo Maiuri
Force-biased nuclear import sets nuclear-cytoplasmic volumetric coupling by osmosis.
Paolo Maiuri
12:27 - 12:36
12:36
Understanding Epigenetics of Sex Bias in Immune reactions by X chromosome inactivation
-
Irene Cantone
Understanding Epigenetics of Sex Bias in Immune reactions by X chromosome inactivation
Irene Cantone
12:36 - 12:45
12:45
From Research to Services and back: integrative comparative approaches and open resources while overcoming scientific silos
-
Maria Luisa Chiusano
From Research to Services and back: integrative comparative approaches and open resources while overcoming scientific silos
Maria Luisa Chiusano
12:45 - 12:54
12:54
CTpredX: Enhancing Missense Variant Pathogenicity Prediction in Childhood Cancer Predisposition Genes
-
Ferdinando Bonfiglio
CTpredX: Enhancing Missense Variant Pathogenicity Prediction in Childhood Cancer Predisposition Genes
Ferdinando Bonfiglio
12:54 - 13:00
13:00
13:00 - 14:10
14:10
Proteome and bioinformatic analyses of cellular models of methylmalonic acidemia reveal lysosomal dysregulations
-
Sabrina Bianco
Proteome and bioinformatic analyses of cellular models of methylmalonic acidemia reveal lysosomal dysregulations
Sabrina Bianco
14:10 - 14:19
14:10 - 16:30
14:19
Impact of rare synonymous variants on cancer predisposition
-
Gilda Estinto
Impact of rare synonymous variants on cancer predisposition
Gilda Estinto
14:19 - 14:28
14:28
The oncogenic role of noncoding single nucleotide variants at adrenergic and mesenchymal neuroblastoma core regulatory circuitries active binding sites
-
Vincenzo Aievola
The oncogenic role of noncoding single nucleotide variants at adrenergic and mesenchymal neuroblastoma core regulatory circuitries active binding sites
Vincenzo Aievola
14:28 - 14:37
14:37
Strain-resolved metagenomics for human and food microbiome studies
-
Sara Cavaliere
Strain-resolved metagenomics for human and food microbiome studies
Sara Cavaliere
14:37 - 14:46
14:46
AI-based Design Workflow of De-Novo Antigens by Epitope Scaffolding
-
Francesco Altiero
AI-based Design Workflow of De-Novo Antigens by Epitope Scaffolding
Francesco Altiero
14:46 - 14:55
14:55
Mathematical and numerical modeling of hyperthermia-triggered drug delivery
-
Gabriele Adabbo
Mathematical and numerical modeling of hyperthermia-triggered drug delivery
Gabriele Adabbo
14:55 - 15:04
15:04
Serum multi-omics approach may help redefine management guidelines for patients with Glycogen storage disease type Ia
-
Francesca Pirozzi
Serum multi-omics approach may help redefine management guidelines for patients with Glycogen storage disease type Ia
Francesca Pirozzi
15:04 - 15:13
15:13
MiDNE: Multi-omics genes and Drugs Network Embedding
-
Aurora Brandi
MiDNE: Multi-omics genes and Drugs Network Embedding
Aurora Brandi
15:13 - 15:22
15:22
SimulCell: an in silico simulation system which accurately reproduces the behaviour of specific cell populations growing and migrating on culture dish
-
Elvira Toscano
SimulCell: an in silico simulation system which accurately reproduces the behaviour of specific cell populations growing and migrating on culture dish
Elvira Toscano
15:22 - 15:31
15:31
Simulation of cell morphology using models derived from cell features and components
-
Elena Cimmino
Simulation of cell morphology using models derived from cell features and components
Elena Cimmino
15:31 - 15:40
15:40
Whole Genome Sequencing Unravels Novel Genomic Variants and Their Impact on Tumor Phenotypes in High-Risk Neuroblastoma
-
Giampiero Pirozzi
Whole Genome Sequencing Unravels Novel Genomic Variants and Their Impact on Tumor Phenotypes in High-Risk Neuroblastoma
Giampiero Pirozzi
15:40 - 15:49
15:49
8-oxodG is a driver of the transcription machinery
-
Francesca Gorini
8-oxodG is a driver of the transcription machinery
Francesca Gorini
15:49 - 15:58
15:58
A novel cluster of putative regulatory sequences modulates Tbx1 gene expression
-
Sara Allegretti
A novel cluster of putative regulatory sequences modulates Tbx1 gene expression
Sara Allegretti
15:58 - 16:07
16:07
The contribution of DNA methylation studies to the diagnosis and prognosis of rare genetic disease
-
Giulia De Riso
The contribution of DNA methylation studies to the diagnosis and prognosis of rare genetic disease
Giulia De Riso
16:07 - 16:16
16:16
Polymer physics models predict 3D chromatin organization of SARS-CoV-2 infected cells
-
Andrea Fontana
Polymer physics models predict 3D chromatin organization of SARS-CoV-2 infected cells
Andrea Fontana
16:16 - 16:25
16:25
Impact of Sleep Deprivation on Chromatin Organization in Mouse Hippocampus Cells
-
Florinda Di Pierno
Impact of Sleep Deprivation on Chromatin Organization in Mouse Hippocampus Cells
Florinda Di Pierno
16:25 - 16:30
16:30
Coffee Break
Coffee Break
16:30 - 17:00
17:00
Multicellular PID Control of Gene Expression in Microbial Consortia
-
Vittoria Martinelli
Multicellular PID Control of Gene Expression in Microbial Consortia
Vittoria Martinelli
17:00 - 17:09
17:00 - 18:20
17:09
Modelling 2D Nanoflake - Bacterium Interactions in Solutions
-
Leto Nicolas & Jaber Elia
Modelling 2D Nanoflake - Bacterium Interactions in Solutions
Leto Nicolas & Jaber Elia
17:09 - 17:18
17:18
Multi-omics data integration methods for cancer-subtyping, drug discovery and tumor-model alignment
-
Giovanni Scala
Multi-omics data integration methods for cancer-subtyping, drug discovery and tumor-model alignment
Giovanni Scala
17:18 - 17:27
17:27
A new docking protocol to predict metal/DNA interactions
-
Gabriella Tito
A new docking protocol to predict metal/DNA interactions
Gabriella Tito
17:27 - 17:36
17:36
Binding of [V(IV)O(8-HQ)(H2O)]+ to the model protein lysozyme: structural and computational studies
-
Maddalena Paolillo
Binding of [V(IV)O(8-HQ)(H2O)]+ to the model protein lysozyme: structural and computational studies
Maddalena Paolillo
17:36 - 17:45
17:45
A biomolecular circuit for high-performance in vivo biosensing: monitoring of copper levels in Wilson Disease
-
Lorena Postiglione
A biomolecular circuit for high-performance in vivo biosensing: monitoring of copper levels in Wilson Disease
Lorena Postiglione
17:45 - 17:54
17:54
Towards Exabyte-Scale Genomics: Advanced Hardware-Software Solutions for Efficient Read Mapping
-
Stefano Mercogliano
Towards Exabyte-Scale Genomics: Advanced Hardware-Software Solutions for Efficient Read Mapping
Stefano Mercogliano
17:54 - 18:03
18:03
Prostate tumors laser ablation: mathematical model and protocol multi-objective optimization framework establishment.
-
Giovanni Napoli
Prostate tumors laser ablation: mathematical model and protocol multi-objective optimization framework establishment.
Giovanni Napoli
18:03 - 18:12
18:12
Multiscale Modeling in Magnetic Hyperthermia: From Thermal Model Assessment to Tumor Microenvironment Simulation
-
Andrea Cafarchio
Multiscale Modeling in Magnetic Hyperthermia: From Thermal Model Assessment to Tumor Microenvironment Simulation
Andrea Cafarchio
18:12 - 18:20
18:20
Conclusioni
Conclusioni
18:20 - 18:30